Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col8a2P25318 Golph3-202ENSMUST00000226517 2359 ntBASIC16.23■□□□□ 0.19
Col8a2P25318 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.23■□□□□ 0.19
Col8a2P25318 Gm42569-201ENSMUST00000200539 472 ntBASIC16.23■□□□□ 0.19
Col8a2P25318 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.23■□□□□ 0.19
Col8a2P25318 Gm10033-202ENSMUST00000211874 928 ntBASIC16.23■□□□□ 0.19
Col8a2P25318 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Col8a2P25318 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col8a2P25318 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col8a2P25318 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col8a2P25318 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col8a2P25318 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col8a2P25318 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col8a2P25318 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Col8a2P25318 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.22■□□□□ 0.19
Col8a2P25318 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col8a2P25318 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.22■□□□□ 0.19
Col8a2P25318 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col8a2P25318 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.22■□□□□ 0.19
Col8a2P25318 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.22■□□□□ 0.19
Col8a2P25318 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.22■□□□□ 0.19
Col8a2P25318 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col8a2P25318 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.22■□□□□ 0.19
Col8a2P25318 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col8a2P25318 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col8a2P25318 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col8a2P25318 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Col8a2P25318 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Col8a2P25318 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.21■□□□□ 0.19
Col8a2P25318 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col8a2P25318 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.21■□□□□ 0.19
Col8a2P25318 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.21■□□□□ 0.19
Col8a2P25318 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.21■□□□□ 0.19
Col8a2P25318 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.21■□□□□ 0.19
Col8a2P25318 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col8a2P25318 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col8a2P25318 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col8a2P25318 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Col8a2P25318 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col8a2P25318 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col8a2P25318 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col8a2P25318 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col8a2P25318 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Col8a2P25318 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.18■□□□□ 0.18
Col8a2P25318 Gm27801-201ENSMUST00000184174 223 ntBASIC16.18■□□□□ 0.18
Col8a2P25318 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col8a2P25318 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col8a2P25318 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col8a2P25318 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.17■□□□□ 0.18
Col8a2P25318 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.17■□□□□ 0.18
Col8a2P25318 Gm7291-201ENSMUST00000199147 382 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms