Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Pde6bP23440 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6bP23440 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pde6bP23440 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pde6bP23440 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6bP23440 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6bP23440 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6bP23440 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6bP23440 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pde6bP23440 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pde6bP23440 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Pde6bP23440 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6bP23440 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Pde6bP23440 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pde6bP23440 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.03■□□□□ 0.96
Pde6bP23440 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6bP23440 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.03■□□□□ 0.96
Pde6bP23440 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pde6bP23440 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6bP23440 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.03■□□□□ 0.96
Pde6bP23440 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.03■□□□□ 0.96
Pde6bP23440 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pde6bP23440 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6bP23440 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6bP23440 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6bP23440 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pde6bP23440 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.02■□□□□ 0.96
Pde6bP23440 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pde6bP23440 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6bP23440 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.02■□□□□ 0.96
Pde6bP23440 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.02■□□□□ 0.96
Pde6bP23440 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6bP23440 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.02■□□□□ 0.96
Pde6bP23440 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6bP23440 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pde6bP23440 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.02■□□□□ 0.95
Pde6bP23440 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pde6bP23440 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6bP23440 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6bP23440 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.01■□□□□ 0.95
Pde6bP23440 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6bP23440 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6bP23440 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pde6bP23440 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6bP23440 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pde6bP23440 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pde6bP23440 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21■□□□□ 0.95
Pde6bP23440 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6bP23440 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pde6bP23440 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pde6bP23440 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6bP23440 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6bP23440 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6bP23440 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6bP23440 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pde6bP23440 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pde6bP23440 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pde6bP23440 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6bP23440 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6bP23440 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6bP23440 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6bP23440 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Pde6bP23440 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.98■□□□□ 0.95
Pde6bP23440 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.98■□□□□ 0.95
Pde6bP23440 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6bP23440 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6bP23440 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.97■□□□□ 0.95
Pde6bP23440 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6bP23440 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6bP23440 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6bP23440 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.96■□□□□ 0.95
Pde6bP23440 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6bP23440 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6bP23440 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms