Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Gm43060-201ENSMUST00000200621 289 ntBASIC18.28■□□□□ 0.52
ChrneP20782 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChrneP20782 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChrneP20782 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChrneP20782 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.27■□□□□ 0.52
ChrneP20782 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ChrneP20782 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChrneP20782 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChrneP20782 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.27■□□□□ 0.52
ChrneP20782 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ChrneP20782 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.27■□□□□ 0.52
ChrneP20782 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChrneP20782 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.27■□□□□ 0.52
ChrneP20782 Gm11421-201ENSMUST00000122124 294 ntBASIC18.26■□□□□ 0.51
ChrneP20782 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChrneP20782 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChrneP20782 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ChrneP20782 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.26■□□□□ 0.51
ChrneP20782 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ChrneP20782 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.26■□□□□ 0.51
ChrneP20782 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ChrneP20782 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
ChrneP20782 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ChrneP20782 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChrneP20782 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
ChrneP20782 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
ChrneP20782 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
ChrneP20782 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChrneP20782 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChrneP20782 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ChrneP20782 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.25■□□□□ 0.51
ChrneP20782 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChrneP20782 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ChrneP20782 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ChrneP20782 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ChrneP20782 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ChrneP20782 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChrneP20782 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChrneP20782 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ChrneP20782 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.25■□□□□ 0.51
ChrneP20782 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ChrneP20782 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.24■□□□□ 0.51
ChrneP20782 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ChrneP20782 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ChrneP20782 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.23■□□□□ 0.51
ChrneP20782 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.23■□□□□ 0.51
ChrneP20782 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ChrneP20782 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ChrneP20782 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.23■□□□□ 0.51
ChrneP20782 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
ChrneP20782 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChrneP20782 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
ChrneP20782 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ChrneP20782 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.22■□□□□ 0.51
ChrneP20782 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChrneP20782 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ChrneP20782 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Gm18284-201ENSMUST00000172604 624 ntBASIC18.21■□□□□ 0.51
ChrneP20782 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChrneP20782 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms