Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd48P18181 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd48P18181 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd48P18181 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.32■□□□□ 0.36
Cd48P18181 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Cd48P18181 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cd48P18181 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cd48P18181 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cd48P18181 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cd48P18181 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd48P18181 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd48P18181 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd48P18181 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cd48P18181 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd48P18181 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd48P18181 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd48P18181 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.3■□□□□ 0.36
Cd48P18181 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd48P18181 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd48P18181 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd48P18181 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd48P18181 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd48P18181 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd48P18181 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.29■□□□□ 0.36
Cd48P18181 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd48P18181 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd48P18181 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cd48P18181 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd48P18181 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd48P18181 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd48P18181 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd48P18181 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd48P18181 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd48P18181 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd48P18181 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.28■□□□□ 0.36
Cd48P18181 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd48P18181 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cd48P18181 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Cd48P18181 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd48P18181 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd48P18181 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd48P18181 Gm14117-201ENSMUST00000122417 843 ntBASIC17.27■□□□□ 0.36
Cd48P18181 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd48P18181 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.27■□□□□ 0.35
Cd48P18181 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd48P18181 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd48P18181 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd48P18181 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd48P18181 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cd48P18181 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd48P18181 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cd48P18181 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd48P18181 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd48P18181 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cd48P18181 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd48P18181 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd48P18181 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cd48P18181 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.25■□□□□ 0.35
Cd48P18181 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cd48P18181 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.25■□□□□ 0.35
Cd48P18181 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.25■□□□□ 0.35
Cd48P18181 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.25■□□□□ 0.35
Cd48P18181 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Cd48P18181 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cd48P18181 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd48P18181 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms