Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Irf1P15314 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Irf1P15314 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf1P15314 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.79■□□□□ 0.44
Irf1P15314 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf1P15314 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Irf1P15314 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Irf1P15314 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Irf1P15314 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf1P15314 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Irf1P15314 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Irf1P15314 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Irf1P15314 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.78■□□□□ 0.44
Irf1P15314 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.78■□□□□ 0.44
Irf1P15314 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf1P15314 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf1P15314 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Irf1P15314 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.77■□□□□ 0.44
Irf1P15314 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Irf1P15314 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Irf1P15314 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.77■□□□□ 0.44
Irf1P15314 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.77■□□□□ 0.43
Irf1P15314 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Irf1P15314 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Irf1P15314 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Smad6-203ENSMUST00000179458 273 ntBASIC17.76■□□□□ 0.43
Irf1P15314 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Irf1P15314 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Irf1P15314 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Gm18284-201ENSMUST00000172604 624 ntBASIC17.75■□□□□ 0.43
Irf1P15314 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Irf1P15314 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Irf1P15314 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Irf1P15314 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf1P15314 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.74■□□□□ 0.43
Irf1P15314 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Irf1P15314 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.74■□□□□ 0.43
Irf1P15314 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.74■□□□□ 0.43
Irf1P15314 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Gm11421-201ENSMUST00000122124 294 ntBASIC17.74■□□□□ 0.43
Irf1P15314 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.74■□□□□ 0.43
Irf1P15314 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Irf1P15314 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf1P15314 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf1P15314 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Irf1P15314 Gm5874-201ENSMUST00000096101 508 ntBASIC17.73■□□□□ 0.43
Irf1P15314 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf1P15314 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf1P15314 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Irf1P15314 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Irf1P15314 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Irf1P15314 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Gm8495-201ENSMUST00000188740 694 ntBASIC17.72■□□□□ 0.43
Irf1P15314 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Irf1P15314 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Irf1P15314 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Irf1P15314 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf1P15314 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Irf1P15314 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms