Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fn1P11276 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fn1P11276 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.14■□□□□ 0.01
Fn1P11276 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fn1P11276 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Fn1P11276 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.13■□□□□ 0.01
Fn1P11276 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Fn1P11276 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Fn1P11276 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.13■□□□□ 0.01
Fn1P11276 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fn1P11276 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.12■□□□□ 0.01
Fn1P11276 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.12■□□□□ 0.01
Fn1P11276 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.12■□□□□ 0.01
Fn1P11276 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fn1P11276 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.12■□□□□ 0.01
Fn1P11276 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fn1P11276 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fn1P11276 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fn1P11276 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fn1P11276 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.11■□□□□ 0.01
Fn1P11276 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.11■□□□□ 0.01
Fn1P11276 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.11■□□□□ 0.01
Fn1P11276 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Fn1P11276 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fn1P11276 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.11■□□□□ 0.01
Fn1P11276 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fn1P11276 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fn1P11276 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.1■□□□□ 0.01
Fn1P11276 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fn1P11276 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fn1P11276 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Fn1P11276 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.1■□□□□ 0.01
Fn1P11276 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Fn1P11276 Gm5867-201ENSMUST00000063197 592 ntBASIC15.1■□□□□ 0.01
Fn1P11276 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fn1P11276 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Fn1P11276 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fn1P11276 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fn1P11276 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Fn1P11276 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.09■□□□□ 0.01
Fn1P11276 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fn1P11276 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.09■□□□□ 0.01
Fn1P11276 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fn1P11276 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fn1P11276 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fn1P11276 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Fn1P11276 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Fn1P11276 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Fn1P11276 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fn1P11276 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Fn1P11276 Gm2399-201ENSMUST00000104944 225 ntBASIC15.08■□□□□ 0.01
Fn1P11276 Ank2-226ENSMUST00000189368 339 ntBASIC15.08■□□□□ 0.01
Fn1P11276 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Fn1P11276 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Fn1P11276 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Fn1P11276 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.08■□□□□ 0
Fn1P11276 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Fn1P11276 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fn1P11276 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Fn1P11276 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.08■□□□□ 0
Fn1P11276 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fn1P11276 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.08■□□□□ 0
Fn1P11276 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.07■□□□□ 0
Fn1P11276 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fn1P11276 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fn1P11276 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.06■□□□□ 0
Fn1P11276 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Fn1P11276 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.06■□□□□ 0
Fn1P11276 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fn1P11276 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Fn1P11276 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Fn1P11276 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fn1P11276 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fn1P11276 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.05■□□□□ 0
Fn1P11276 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.05■□□□□ 0
Fn1P11276 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Fn1P11276 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Fn1P11276 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.05■□□□□ 0
Fn1P11276 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.05■□□□□ 0
Fn1P11276 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fn1P11276 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fn1P11276 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fn1P11276 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms