Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccl3P10855 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccl3P10855 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl3P10855 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccl3P10855 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
Ccl3P10855 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccl3P10855 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl3P10855 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccl3P10855 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Ccl3P10855 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccl3P10855 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl3P10855 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccl3P10855 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.21■□□□□ 0.35
Ccl3P10855 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccl3P10855 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl3P10855 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccl3P10855 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.2■□□□□ 0.34
Ccl3P10855 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ccl3P10855 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 Gm13168-201ENSMUST00000121771 632 ntBASIC17.2■□□□□ 0.34
Ccl3P10855 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccl3P10855 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.2■□□□□ 0.34
Ccl3P10855 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.2■□□□□ 0.34
Ccl3P10855 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccl3P10855 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccl3P10855 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.2■□□□□ 0.34
Ccl3P10855 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl3P10855 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.19■□□□□ 0.34
Ccl3P10855 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.19■□□□□ 0.34
Ccl3P10855 Gm7860-201ENSMUST00000121190 879 ntBASIC17.19■□□□□ 0.34
Ccl3P10855 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.19■□□□□ 0.34
Ccl3P10855 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.19■□□□□ 0.34
Ccl3P10855 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccl3P10855 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ccl3P10855 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccl3P10855 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl3P10855 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccl3P10855 Gm10252-201ENSMUST00000209541 832 ntBASIC17.18■□□□□ 0.34
Ccl3P10855 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl3P10855 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccl3P10855 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccl3P10855 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccl3P10855 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccl3P10855 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Gm37856-201ENSMUST00000191634 999 ntBASIC17.17■□□□□ 0.34
Ccl3P10855 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
Ccl3P10855 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccl3P10855 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Ccl3P10855 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl3P10855 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Ccl3P10855 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl3P10855 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl3P10855 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccl3P10855 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Ccl3P10855 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms