Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxa9P09631 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hoxa9P09631 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxa9P09631 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.51■□□□□ 0.71
Hoxa9P09631 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa9P09631 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa9P09631 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa9P09631 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa9P09631 Gm13146-201ENSMUST00000118508 780 ntBASIC19.5■□□□□ 0.71
Hoxa9P09631 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa9P09631 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.5■□□□□ 0.71
Hoxa9P09631 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hoxa9P09631 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa9P09631 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxa9P09631 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.49■□□□□ 0.71
Hoxa9P09631 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.49■□□□□ 0.71
Hoxa9P09631 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa9P09631 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa9P09631 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hoxa9P09631 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa9P09631 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Hoxa9P09631 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa9P09631 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa9P09631 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.48■□□□□ 0.71
Hoxa9P09631 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa9P09631 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hoxa9P09631 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.48■□□□□ 0.71
Hoxa9P09631 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.48■□□□□ 0.71
Hoxa9P09631 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hoxa9P09631 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa9P09631 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa9P09631 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa9P09631 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa9P09631 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa9P09631 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa9P09631 Mir5133-201ENSMUST00000174955 77 ntBASIC19.47■□□□□ 0.71
Hoxa9P09631 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa9P09631 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.47■□□□□ 0.71
Hoxa9P09631 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa9P09631 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hoxa9P09631 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa9P09631 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa9P09631 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hoxa9P09631 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hoxa9P09631 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Hoxa9P09631 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.46■□□□□ 0.71
Hoxa9P09631 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa9P09631 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.45■□□□□ 0.7
Hoxa9P09631 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa9P09631 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa9P09631 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa9P09631 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hoxa9P09631 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa9P09631 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Hoxa9P09631 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hoxa9P09631 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.44■□□□□ 0.7
Hoxa9P09631 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa9P09631 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa9P09631 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.44■□□□□ 0.7
Hoxa9P09631 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hoxa9P09631 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.44■□□□□ 0.7
Hoxa9P09631 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa9P09631 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hoxa9P09631 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxa9P09631 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxa9P09631 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Gm12441-201ENSMUST00000121806 588 ntBASIC19.43■□□□□ 0.7
Hoxa9P09631 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.43■□□□□ 0.7
Hoxa9P09631 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.43■□□□□ 0.7
Hoxa9P09631 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Hoxa9P09631 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.43■□□□□ 0.7
Hoxa9P09631 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms