Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.92■□□□□ 0.94
Hoxc8P09025 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Hoxc8P09025 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Hoxc8P09025 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hoxc8P09025 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc8P09025 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.9■□□□□ 0.94
Hoxc8P09025 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc8P09025 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc8P09025 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.9■□□□□ 0.94
Hoxc8P09025 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc8P09025 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc8P09025 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
Hoxc8P09025 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
Hoxc8P09025 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.89■□□□□ 0.94
Hoxc8P09025 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxc8P09025 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Hoxc8P09025 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxc8P09025 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc8P09025 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Hoxc8P09025 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hoxc8P09025 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc8P09025 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc8P09025 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.89■□□□□ 0.93
Hoxc8P09025 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.89■□□□□ 0.93
Hoxc8P09025 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.89■□□□□ 0.93
Hoxc8P09025 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc8P09025 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc8P09025 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc8P09025 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.88■□□□□ 0.93
Hoxc8P09025 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hoxc8P09025 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc8P09025 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc8P09025 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc8P09025 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Hoxc8P09025 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc8P09025 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.87■□□□□ 0.93
Hoxc8P09025 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc8P09025 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc8P09025 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc8P09025 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.87■□□□□ 0.93
Hoxc8P09025 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc8P09025 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.87■□□□□ 0.93
Hoxc8P09025 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Hoxc8P09025 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc8P09025 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc8P09025 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hoxc8P09025 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc8P09025 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc8P09025 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc8P09025 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc8P09025 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Hoxc8P09025 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc8P09025 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc8P09025 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc8P09025 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.86■□□□□ 0.93
Hoxc8P09025 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxc8P09025 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxc8P09025 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc8P09025 Gm22240-201ENSMUST00000175225 82 ntBASIC20.85■□□□□ 0.93
Hoxc8P09025 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc8P09025 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc8P09025 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc8P09025 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxc8P09025 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc8P09025 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc8P09025 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc8P09025 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc8P09025 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc8P09025 Gm8520-201ENSMUST00000186517 868 ntBASIC20.84■□□□□ 0.93
Hoxc8P09025 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc8P09025 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.84■□□□□ 0.93
Hoxc8P09025 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc8P09025 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc8P09025 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hoxc8P09025 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hoxc8P09025 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.83■□□□□ 0.93
Hoxc8P09025 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.83■□□□□ 0.93
Hoxc8P09025 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.83■□□□□ 0.93
Hoxc8P09025 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc8P09025 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Hoxc8P09025 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc8P09025 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc8P09025 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc8P09025 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.82■□□□□ 0.92
Hoxc8P09025 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hoxc8P09025 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc8P09025 Gm37856-201ENSMUST00000191634 999 ntBASIC20.82■□□□□ 0.92
Hoxc8P09025 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.81■□□□□ 0.92
Hoxc8P09025 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.81■□□□□ 0.92
Hoxc8P09025 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms