Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Cd74P04441 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.18■□□□□ 0.18
Cd74P04441 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.17■□□□□ 0.18
Cd74P04441 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Cd74P04441 Gm8495-201ENSMUST00000188740 694 ntBASIC16.17■□□□□ 0.18
Cd74P04441 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Cd74P04441 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cd74P04441 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cd74P04441 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd74P04441 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Cd74P04441 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.16■□□□□ 0.18
Cd74P04441 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cd74P04441 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Cd74P04441 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.16■□□□□ 0.18
Cd74P04441 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.16■□□□□ 0.18
Cd74P04441 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Cd74P04441 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cd74P04441 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cd74P04441 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cd74P04441 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd74P04441 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd74P04441 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cd74P04441 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.14■□□□□ 0.17
Cd74P04441 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Cd74P04441 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.14■□□□□ 0.17
Cd74P04441 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Gm18284-201ENSMUST00000172604 624 ntBASIC16.14■□□□□ 0.17
Cd74P04441 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.14■□□□□ 0.17
Cd74P04441 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cd74P04441 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd74P04441 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cd74P04441 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd74P04441 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd74P04441 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cd74P04441 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd74P04441 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cd74P04441 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd74P04441 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cd74P04441 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd74P04441 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.12■□□□□ 0.17
Cd74P04441 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cd74P04441 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.12■□□□□ 0.17
Cd74P04441 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.12■□□□□ 0.17
Cd74P04441 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.12■□□□□ 0.17
Cd74P04441 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd74P04441 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms