Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01878 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01878 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01878 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P01878 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01878 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.15■□□□□ 0.82
P01878 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
P01878 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01878 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
P01878 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01878 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P01878 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
P01878 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01878 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.14■□□□□ 0.81
P01878 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.14■□□□□ 0.81
P01878 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01878 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P01878 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01878 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
P01878 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Gm6211-202ENSMUST00000167849 925 ntBASIC20.13■□□□□ 0.81
P01878 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.13■□□□□ 0.81
P01878 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.13■□□□□ 0.81
P01878 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01878 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01878 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01878 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.12■□□□□ 0.81
P01878 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01878 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01878 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01878 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01878 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01878 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P01878 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01878 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01878 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P01878 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01878 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.11■□□□□ 0.81
P01878 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
P01878 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01878 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01878 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01878 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.1■□□□□ 0.81
P01878 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
P01878 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.1■□□□□ 0.81
P01878 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01878 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01878 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01878 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01878 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01878 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.09■□□□□ 0.81
P01878 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
P01878 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
P01878 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
P01878 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01878 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01878 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01878 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01878 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
P01878 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.08■□□□□ 0.81
P01878 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01878 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01878 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
P01878 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01878 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P01878 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.07■□□□□ 0.8
P01878 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.07■□□□□ 0.8
P01878 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.07■□□□□ 0.8
P01878 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.07■□□□□ 0.8
P01878 Gm5408-201ENSMUST00000197998 747 ntBASIC20.07■□□□□ 0.8
P01878 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P01878 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
P01878 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01878 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01878 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
P01878 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01878 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01878 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01878 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01878 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01878 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01878 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.06■□□□□ 0.8
P01878 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms