Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01852 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
P01852 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
P01852 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
P01852 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
P01852 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
P01852 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P01852 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
P01852 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.66■□□□□ 0.42
P01852 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.66■□□□□ 0.42
P01852 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.66■□□□□ 0.42
P01852 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P01852 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01852 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
P01852 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.65■□□□□ 0.42
P01852 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.65■□□□□ 0.42
P01852 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01852 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.65■□□□□ 0.42
P01852 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01852 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.65■□□□□ 0.42
P01852 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
P01852 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01852 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01852 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.64■□□□□ 0.42
P01852 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
P01852 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
P01852 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.64■□□□□ 0.41
P01852 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.64■□□□□ 0.41
P01852 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.64■□□□□ 0.41
P01852 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.64■□□□□ 0.41
P01852 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P01852 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01852 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
P01852 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P01852 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P01852 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
P01852 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.63■□□□□ 0.41
P01852 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
P01852 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P01852 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P01852 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.62■□□□□ 0.41
P01852 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.62■□□□□ 0.41
P01852 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
P01852 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.62■□□□□ 0.41
P01852 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.62■□□□□ 0.41
P01852 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01852 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
P01852 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.61■□□□□ 0.41
P01852 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 AA386476-201ENSMUST00000098781 1665 ntBASIC17.61■□□□□ 0.41
P01852 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01852 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
P01852 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.6■□□□□ 0.41
P01852 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.6■□□□□ 0.41
P01852 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
P01852 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms