Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.1□□□□□ -0.15
TcraP01849 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.1□□□□□ -0.15
TcraP01849 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TcraP01849 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.1□□□□□ -0.15
TcraP01849 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.09□□□□□ -0.15
TcraP01849 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.09□□□□□ -0.15
TcraP01849 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TcraP01849 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TcraP01849 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TcraP01849 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TcraP01849 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TcraP01849 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TcraP01849 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.08□□□□□ -0.16
TcraP01849 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TcraP01849 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TcraP01849 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.07□□□□□ -0.16
TcraP01849 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TcraP01849 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.07□□□□□ -0.16
TcraP01849 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TcraP01849 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.07□□□□□ -0.16
TcraP01849 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TcraP01849 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TcraP01849 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TcraP01849 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TcraP01849 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms