Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Hdac3O88895 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Hdac3O88895 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Hdac3O88895 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.21■□□□□ 0.35
Hdac3O88895 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.21■□□□□ 0.35
Hdac3O88895 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Hdac3O88895 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.21■□□□□ 0.35
Hdac3O88895 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.21■□□□□ 0.35
Hdac3O88895 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac3O88895 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Hdac3O88895 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.21■□□□□ 0.34
Hdac3O88895 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.2■□□□□ 0.34
Hdac3O88895 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hdac3O88895 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac3O88895 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.19■□□□□ 0.34
Hdac3O88895 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hdac3O88895 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hdac3O88895 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hdac3O88895 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac3O88895 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.18■□□□□ 0.34
Hdac3O88895 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.18■□□□□ 0.34
Hdac3O88895 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Hdac3O88895 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac3O88895 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.18■□□□□ 0.34
Hdac3O88895 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.18■□□□□ 0.34
Hdac3O88895 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.18■□□□□ 0.34
Hdac3O88895 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac3O88895 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac3O88895 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac3O88895 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac3O88895 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Hdac3O88895 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.16■□□□□ 0.34
Hdac3O88895 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac3O88895 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac3O88895 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.16■□□□□ 0.34
Hdac3O88895 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Hdac3O88895 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hdac3O88895 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac3O88895 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac3O88895 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac3O88895 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac3O88895 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac3O88895 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac3O88895 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hdac3O88895 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac3O88895 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.15■□□□□ 0.34
Hdac3O88895 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac3O88895 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac3O88895 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac3O88895 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.15■□□□□ 0.34
Hdac3O88895 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Hdac3O88895 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.15■□□□□ 0.34
Hdac3O88895 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hdac3O88895 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac3O88895 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac3O88895 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms