Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm7860-201ENSMUST00000121190 879 ntBASIC18.71■□□□□ 0.59
Best1O88870 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Best1O88870 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.71■□□□□ 0.59
Best1O88870 Gm7514-201ENSMUST00000209475 934 ntBASIC18.71■□□□□ 0.59
Best1O88870 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.71■□□□□ 0.59
Best1O88870 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.71■□□□□ 0.59
Best1O88870 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Best1O88870 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Best1O88870 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Best1O88870 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Best1O88870 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Best1O88870 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Best1O88870 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Best1O88870 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Best1O88870 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Best1O88870 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Best1O88870 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Best1O88870 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Best1O88870 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Best1O88870 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Best1O88870 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Best1O88870 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Best1O88870 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Best1O88870 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Best1O88870 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Best1O88870 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Best1O88870 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Best1O88870 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Best1O88870 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Best1O88870 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Gm13534-201ENSMUST00000121169 513 ntBASIC18.67■□□□□ 0.58
Best1O88870 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Best1O88870 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.67■□□□□ 0.58
Best1O88870 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Best1O88870 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Best1O88870 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Best1O88870 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.66■□□□□ 0.58
Best1O88870 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Best1O88870 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.66■□□□□ 0.58
Best1O88870 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.66■□□□□ 0.58
Best1O88870 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Best1O88870 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Best1O88870 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Best1O88870 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Best1O88870 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.66■□□□□ 0.58
Best1O88870 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Best1O88870 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Best1O88870 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Best1O88870 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.66■□□□□ 0.58
Best1O88870 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Best1O88870 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Best1O88870 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Best1O88870 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Best1O88870 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Best1O88870 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Best1O88870 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.65■□□□□ 0.58
Best1O88870 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.65■□□□□ 0.58
Best1O88870 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Best1O88870 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Best1O88870 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.65■□□□□ 0.58
Best1O88870 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.65■□□□□ 0.58
Best1O88870 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Best1O88870 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Best1O88870 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Best1O88870 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Best1O88870 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Best1O88870 Gm12933-201ENSMUST00000120203 872 ntBASIC18.64■□□□□ 0.57
Best1O88870 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.64■□□□□ 0.57
Best1O88870 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.64■□□□□ 0.57
Best1O88870 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.64■□□□□ 0.57
Best1O88870 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Best1O88870 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms