Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DcxO88809 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DcxO88809 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.11■□□□□ 0.97
DcxO88809 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DcxO88809 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DcxO88809 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DcxO88809 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DcxO88809 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DcxO88809 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DcxO88809 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.1■□□□□ 0.97
DcxO88809 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
DcxO88809 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 Gm715-201ENSMUST00000117865 831 ntBASIC21.1■□□□□ 0.97
DcxO88809 Gm11643-201ENSMUST00000119578 864 ntBASIC21.1■□□□□ 0.97
DcxO88809 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.1■□□□□ 0.97
DcxO88809 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.1■□□□□ 0.97
DcxO88809 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
DcxO88809 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DcxO88809 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DcxO88809 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DcxO88809 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.09■□□□□ 0.97
DcxO88809 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.09■□□□□ 0.97
DcxO88809 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.09■□□□□ 0.97
DcxO88809 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DcxO88809 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.08■□□□□ 0.97
DcxO88809 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
DcxO88809 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DcxO88809 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
DcxO88809 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DcxO88809 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DcxO88809 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
DcxO88809 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DcxO88809 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DcxO88809 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DcxO88809 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.07■□□□□ 0.96
DcxO88809 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DcxO88809 Gm27275-201ENSMUST00000184318 272 ntBASIC21.07■□□□□ 0.96
DcxO88809 Gm26524-201ENSMUST00000192339 390 ntBASIC21.07■□□□□ 0.96
DcxO88809 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
DcxO88809 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DcxO88809 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.06■□□□□ 0.96
DcxO88809 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DcxO88809 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
DcxO88809 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DcxO88809 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DcxO88809 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DcxO88809 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DcxO88809 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DcxO88809 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DcxO88809 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.05■□□□□ 0.96
DcxO88809 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DcxO88809 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.05■□□□□ 0.96
DcxO88809 Rab3c-203ENSMUST00000224180 967 ntBASIC21.05■□□□□ 0.96
DcxO88809 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
DcxO88809 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DcxO88809 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 Gm5643-201ENSMUST00000117081 966 ntBASIC21.04■□□□□ 0.96
DcxO88809 Gm15565-201ENSMUST00000118890 427 ntBASIC21.04■□□□□ 0.96
DcxO88809 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.04■□□□□ 0.96
DcxO88809 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.04■□□□□ 0.96
DcxO88809 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.04■□□□□ 0.96
DcxO88809 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
DcxO88809 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DcxO88809 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.04■□□□□ 0.96
DcxO88809 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DcxO88809 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DcxO88809 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DcxO88809 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DcxO88809 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DcxO88809 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.02■□□□□ 0.96
DcxO88809 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DcxO88809 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
DcxO88809 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DcxO88809 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DcxO88809 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.02■□□□□ 0.96
DcxO88809 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
DcxO88809 Gm38205-201ENSMUST00000192243 258 ntBASIC21.02■□□□□ 0.96
DcxO88809 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DcxO88809 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DcxO88809 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms