Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc28a2O88627 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Slc28a2O88627 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc28a2O88627 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc28a2O88627 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc28a2O88627 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc28a2O88627 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.17■□□□□ 0.34
Slc28a2O88627 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc28a2O88627 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc28a2O88627 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc28a2O88627 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc28a2O88627 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a2O88627 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a2O88627 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc28a2O88627 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a2O88627 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
Slc28a2O88627 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Slc28a2O88627 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a2O88627 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a2O88627 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a2O88627 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a2O88627 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc28a2O88627 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a2O88627 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a2O88627 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
Slc28a2O88627 Mir6236-201ENSMUST00000184437 123 ntBASIC17.15■□□□□ 0.34
Slc28a2O88627 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.15■□□□□ 0.34
Slc28a2O88627 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a2O88627 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.15■□□□□ 0.34
Slc28a2O88627 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a2O88627 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a2O88627 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc28a2O88627 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc28a2O88627 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc28a2O88627 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc28a2O88627 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a2O88627 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc28a2O88627 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc28a2O88627 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.13■□□□□ 0.33
Slc28a2O88627 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a2O88627 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc28a2O88627 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc28a2O88627 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc28a2O88627 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a2O88627 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc28a2O88627 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc28a2O88627 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slc28a2O88627 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc28a2O88627 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.11■□□□□ 0.33
Slc28a2O88627 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.11■□□□□ 0.33
Slc28a2O88627 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc28a2O88627 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a2O88627 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms