Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.29■□□□□ 0.36
Cops3O88543 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops3O88543 Gm5812-201ENSMUST00000061073 957 ntBASIC17.29■□□□□ 0.36
Cops3O88543 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops3O88543 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.29■□□□□ 0.36
Cops3O88543 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cops3O88543 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.29■□□□□ 0.36
Cops3O88543 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.28■□□□□ 0.36
Cops3O88543 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cops3O88543 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.28■□□□□ 0.36
Cops3O88543 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cops3O88543 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops3O88543 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Cops3O88543 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Cops3O88543 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops3O88543 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops3O88543 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops3O88543 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cops3O88543 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.27■□□□□ 0.36
Cops3O88543 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops3O88543 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cops3O88543 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cops3O88543 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops3O88543 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops3O88543 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cops3O88543 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops3O88543 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops3O88543 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cops3O88543 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.26■□□□□ 0.35
Cops3O88543 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops3O88543 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cops3O88543 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops3O88543 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops3O88543 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.25■□□□□ 0.35
Cops3O88543 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops3O88543 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops3O88543 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 AA386476-201ENSMUST00000098781 1665 ntBASIC17.25■□□□□ 0.35
Cops3O88543 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops3O88543 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cops3O88543 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops3O88543 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops3O88543 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops3O88543 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops3O88543 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cops3O88543 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops3O88543 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops3O88543 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cops3O88543 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cops3O88543 Gm15546-201ENSMUST00000122095 826 ntBASIC17.24■□□□□ 0.35
Cops3O88543 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cops3O88543 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Cops3O88543 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops3O88543 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops3O88543 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.24■□□□□ 0.35
Cops3O88543 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.24■□□□□ 0.35
Cops3O88543 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops3O88543 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops3O88543 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops3O88543 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cops3O88543 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops3O88543 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Cops3O88543 Gm22238-201ENSMUST00000175222 88 ntBASIC17.23■□□□□ 0.35
Cops3O88543 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Cops3O88543 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops3O88543 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cops3O88543 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Cops3O88543 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops3O88543 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops3O88543 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cops3O88543 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops3O88543 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cops3O88543 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cops3O88543 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Cops3O88543 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops3O88543 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops3O88543 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Cops3O88543 Gm9959-201ENSMUST00000068277 390 ntBASIC17.22■□□□□ 0.35
Cops3O88543 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops3O88543 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops3O88543 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops3O88543 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops3O88543 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms