Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.8■□□□□ 0.44
Capns1O88456 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Capns1O88456 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Capns1O88456 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Capns1O88456 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Capns1O88456 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Capns1O88456 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Capns1O88456 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Capns1O88456 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.8■□□□□ 0.44
Capns1O88456 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.8■□□□□ 0.44
Capns1O88456 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Capns1O88456 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Capns1O88456 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Capns1O88456 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Capns1O88456 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Capns1O88456 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.79■□□□□ 0.44
Capns1O88456 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.79■□□□□ 0.44
Capns1O88456 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.79■□□□□ 0.44
Capns1O88456 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.79■□□□□ 0.44
Capns1O88456 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Capns1O88456 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Capns1O88456 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.78■□□□□ 0.44
Capns1O88456 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Capns1O88456 Gm45417-201ENSMUST00000209533 758 ntBASIC17.78■□□□□ 0.44
Capns1O88456 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.78■□□□□ 0.44
Capns1O88456 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capns1O88456 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capns1O88456 Rarb-207ENSMUST00000225921 2756 ntBASIC17.77■□□□□ 0.44
Capns1O88456 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capns1O88456 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Capns1O88456 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Capns1O88456 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capns1O88456 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Capns1O88456 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Capns1O88456 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Capns1O88456 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Capns1O88456 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capns1O88456 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Capns1O88456 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Capns1O88456 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Capns1O88456 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Capns1O88456 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.76■□□□□ 0.43
Capns1O88456 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capns1O88456 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Capns1O88456 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capns1O88456 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capns1O88456 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capns1O88456 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.76■□□□□ 0.43
Capns1O88456 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capns1O88456 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Capns1O88456 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.75■□□□□ 0.43
Capns1O88456 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.75■□□□□ 0.43
Capns1O88456 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Capns1O88456 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Capns1O88456 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Capns1O88456 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Capns1O88456 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Capns1O88456 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capns1O88456 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Capns1O88456 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.74■□□□□ 0.43
Capns1O88456 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms