Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ttc3O88196 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ttc3O88196 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ttc3O88196 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc3O88196 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc3O88196 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc3O88196 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc3O88196 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc3O88196 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ttc3O88196 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ttc3O88196 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Ttc3O88196 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ttc3O88196 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.49■□□□□ 0.87
Ttc3O88196 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.48■□□□□ 0.87
Ttc3O88196 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc3O88196 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.48■□□□□ 0.87
Ttc3O88196 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc3O88196 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc3O88196 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc3O88196 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc3O88196 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Ttc3O88196 Gm12441-201ENSMUST00000121806 588 ntBASIC20.48■□□□□ 0.87
Ttc3O88196 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc3O88196 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc3O88196 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ttc3O88196 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ttc3O88196 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.47■□□□□ 0.87
Ttc3O88196 Nespas-201ENSMUST00000143738 1083 ntBASIC20.47■□□□□ 0.87
Ttc3O88196 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ttc3O88196 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ttc3O88196 Mir5133-201ENSMUST00000174955 77 ntBASIC20.46■□□□□ 0.87
Ttc3O88196 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc3O88196 Gm4968-201ENSMUST00000071458 858 ntBASIC20.46■□□□□ 0.87
Ttc3O88196 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.46■□□□□ 0.87
Ttc3O88196 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc3O88196 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc3O88196 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc3O88196 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ttc3O88196 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ttc3O88196 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ttc3O88196 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc3O88196 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Gm6211-202ENSMUST00000167849 925 ntBASIC20.45■□□□□ 0.86
Ttc3O88196 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.45■□□□□ 0.86
Ttc3O88196 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ttc3O88196 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ttc3O88196 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.45■□□□□ 0.86
Ttc3O88196 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.45■□□□□ 0.86
Ttc3O88196 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc3O88196 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ttc3O88196 Gm7860-201ENSMUST00000121190 879 ntBASIC20.44■□□□□ 0.86
Ttc3O88196 Gm6365-201ENSMUST00000054711 744 ntBASIC20.44■□□□□ 0.86
Ttc3O88196 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ttc3O88196 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc3O88196 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.43■□□□□ 0.86
Ttc3O88196 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc3O88196 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.43■□□□□ 0.86
Ttc3O88196 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ttc3O88196 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc3O88196 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Ttc3O88196 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.43■□□□□ 0.86
Ttc3O88196 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc3O88196 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ttc3O88196 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc3O88196 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.42■□□□□ 0.86
Ttc3O88196 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Ttc3O88196 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc3O88196 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ttc3O88196 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc3O88196 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Ttc3O88196 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc3O88196 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc3O88196 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.41■□□□□ 0.86
Ttc3O88196 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc3O88196 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ttc3O88196 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc3O88196 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.41■□□□□ 0.86
Ttc3O88196 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc3O88196 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc3O88196 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc3O88196 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.41■□□□□ 0.86
Ttc3O88196 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc3O88196 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ttc3O88196 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc3O88196 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms