Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pfdn2O70591 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pfdn2O70591 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pfdn2O70591 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pfdn2O70591 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.04■□□□□ 0.16
Pfdn2O70591 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.04■□□□□ 0.16
Pfdn2O70591 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pfdn2O70591 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.04■□□□□ 0.16
Pfdn2O70591 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pfdn2O70591 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pfdn2O70591 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pfdn2O70591 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.03■□□□□ 0.16
Pfdn2O70591 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pfdn2O70591 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pfdn2O70591 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Golph3-205ENSMUST00000228671 2842 ntBASIC16.02■□□□□ 0.16
Pfdn2O70591 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pfdn2O70591 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.02■□□□□ 0.16
Pfdn2O70591 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pfdn2O70591 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pfdn2O70591 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pfdn2O70591 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Pfdn2O70591 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pfdn2O70591 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pfdn2O70591 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pfdn2O70591 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pfdn2O70591 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pfdn2O70591 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.01■□□□□ 0.15
Pfdn2O70591 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.01■□□□□ 0.15
Pfdn2O70591 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Pfdn2O70591 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pfdn2O70591 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Pfdn2O70591 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pfdn2O70591 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pfdn2O70591 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.01■□□□□ 0.15
Pfdn2O70591 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pfdn2O70591 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pfdn2O70591 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.99■□□□□ 0.15
Pfdn2O70591 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pfdn2O70591 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pfdn2O70591 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pfdn2O70591 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pfdn2O70591 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pfdn2O70591 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Pfdn2O70591 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pfdn2O70591 Haglr-201ENSMUST00000100000 2085 ntBASIC15.98■□□□□ 0.15
Pfdn2O70591 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pfdn2O70591 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pfdn2O70591 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pfdn2O70591 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms