Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.53■□□□□ 0.4
Alx3O70137 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx3O70137 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Alx3O70137 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx3O70137 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx3O70137 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.52■□□□□ 0.4
Alx3O70137 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx3O70137 Gm14117-201ENSMUST00000122417 843 ntBASIC17.52■□□□□ 0.4
Alx3O70137 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Alx3O70137 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx3O70137 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx3O70137 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx3O70137 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx3O70137 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx3O70137 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx3O70137 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx3O70137 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx3O70137 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx3O70137 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.51■□□□□ 0.39
Alx3O70137 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx3O70137 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Alx3O70137 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Alx3O70137 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx3O70137 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Alx3O70137 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx3O70137 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Alx3O70137 Golph3-205ENSMUST00000228671 2842 ntBASIC17.5■□□□□ 0.39
Alx3O70137 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx3O70137 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
Alx3O70137 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Alx3O70137 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Alx3O70137 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.49■□□□□ 0.39
Alx3O70137 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Alx3O70137 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.49■□□□□ 0.39
Alx3O70137 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx3O70137 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Alx3O70137 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Alx3O70137 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.48■□□□□ 0.39
Alx3O70137 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Alx3O70137 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Alx3O70137 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.48■□□□□ 0.39
Alx3O70137 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.48■□□□□ 0.39
Alx3O70137 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx3O70137 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Alx3O70137 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx3O70137 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Alx3O70137 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx3O70137 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.47■□□□□ 0.39
Alx3O70137 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx3O70137 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx3O70137 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx3O70137 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
Alx3O70137 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Alx3O70137 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Alx3O70137 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
Alx3O70137 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Alx3O70137 Golgb1-201ENSMUST00000023534 498 ntBASIC17.46■□□□□ 0.39
Alx3O70137 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Alx3O70137 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx3O70137 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms