Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh5O55240 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh5O55240 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh5O55240 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh5O55240 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh5O55240 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh5O55240 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh5O55240 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh5O55240 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh5O55240 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh5O55240 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh5O55240 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh5O55240 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh5O55240 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.32■□□□□ 0.52
Rdh5O55240 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.32■□□□□ 0.52
Rdh5O55240 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh5O55240 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh5O55240 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh5O55240 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rdh5O55240 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rdh5O55240 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh5O55240 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.31■□□□□ 0.52
Rdh5O55240 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh5O55240 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh5O55240 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Rdh5O55240 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.3■□□□□ 0.52
Rdh5O55240 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh5O55240 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh5O55240 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rdh5O55240 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh5O55240 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh5O55240 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rdh5O55240 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh5O55240 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.29■□□□□ 0.52
Rdh5O55240 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh5O55240 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rdh5O55240 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.29■□□□□ 0.52
Rdh5O55240 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh5O55240 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh5O55240 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Rdh5O55240 Gm6139-201ENSMUST00000079261 882 ntBASIC18.29■□□□□ 0.52
Rdh5O55240 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh5O55240 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh5O55240 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rdh5O55240 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Rdh5O55240 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rdh5O55240 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh5O55240 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.28■□□□□ 0.52
Rdh5O55240 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh5O55240 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.28■□□□□ 0.52
Rdh5O55240 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.28■□□□□ 0.52
Rdh5O55240 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rdh5O55240 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh5O55240 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh5O55240 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.27■□□□□ 0.52
Rdh5O55240 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh5O55240 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Rdh5O55240 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh5O55240 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh5O55240 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh5O55240 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.27■□□□□ 0.52
Rdh5O55240 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rdh5O55240 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh5O55240 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh5O55240 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh5O55240 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh5O55240 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh5O55240 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh5O55240 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rdh5O55240 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.26■□□□□ 0.51
Rdh5O55240 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Gm8493-201ENSMUST00000196881 489 ntBASIC18.26■□□□□ 0.51
Rdh5O55240 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.26■□□□□ 0.51
Rdh5O55240 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Rdh5O55240 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh5O55240 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh5O55240 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
Rdh5O55240 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms