Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl35aO55142 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl35aO55142 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rpl35aO55142 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl35aO55142 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.4□□□□□ -0.1
Rpl35aO55142 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl35aO55142 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl35aO55142 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl35aO55142 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpl35aO55142 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl35aO55142 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpl35aO55142 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rpl35aO55142 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rpl35aO55142 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl35aO55142 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rpl35aO55142 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl35aO55142 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.38□□□□□ -0.11
Rpl35aO55142 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rpl35aO55142 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rpl35aO55142 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpl35aO55142 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rpl35aO55142 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl35aO55142 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Rpl35aO55142 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.37□□□□□ -0.11
Rpl35aO55142 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpl35aO55142 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.37□□□□□ -0.11
Rpl35aO55142 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rpl35aO55142 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl35aO55142 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rpl35aO55142 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rpl35aO55142 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Rpl35aO55142 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl35aO55142 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.36□□□□□ -0.11
Rpl35aO55142 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.36□□□□□ -0.11
Rpl35aO55142 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpl35aO55142 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpl35aO55142 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpl35aO55142 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpl35aO55142 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms