Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.28■□□□□ 0.04
Pde6dO55057 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.28■□□□□ 0.04
Pde6dO55057 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 BC021767-201ENSMUST00000126387 1716 ntBASIC15.28■□□□□ 0.04
Pde6dO55057 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6dO55057 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6dO55057 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pde6dO55057 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6dO55057 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6dO55057 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pde6dO55057 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6dO55057 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Pde6dO55057 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.27■□□□□ 0.03
Pde6dO55057 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6dO55057 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6dO55057 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6dO55057 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pde6dO55057 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Pde6dO55057 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.26■□□□□ 0.03
Pde6dO55057 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.26■□□□□ 0.03
Pde6dO55057 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Pde6dO55057 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pde6dO55057 Gm11687-201ENSMUST00000118911 886 ntBASIC15.26■□□□□ 0.03
Pde6dO55057 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.26■□□□□ 0.03
Pde6dO55057 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pde6dO55057 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.25■□□□□ 0.03
Pde6dO55057 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.25■□□□□ 0.03
Pde6dO55057 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pde6dO55057 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pde6dO55057 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pde6dO55057 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pde6dO55057 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pde6dO55057 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pde6dO55057 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pde6dO55057 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.24■□□□□ 0.03
Pde6dO55057 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6dO55057 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Pde6dO55057 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6dO55057 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6dO55057 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6dO55057 Grk6-206ENSMUST00000224995 2971 ntBASIC15.22■□□□□ 0.03
Pde6dO55057 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6dO55057 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.22■□□□□ 0.03
Pde6dO55057 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.22■□□□□ 0.03
Pde6dO55057 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6dO55057 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6dO55057 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms