Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Kcnu1O54982 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Kcnu1O54982 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Kcnu1O54982 Golph3-205ENSMUST00000228671 2842 ntBASIC20.66■□□□□ 0.9
Kcnu1O54982 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Kcnu1O54982 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Kcnu1O54982 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Kcnu1O54982 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Kcnu1O54982 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.65■□□□□ 0.9
Kcnu1O54982 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.65■□□□□ 0.9
Kcnu1O54982 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Spcs1-204ENSMUST00000226782 949 ntBASIC20.65■□□□□ 0.9
Kcnu1O54982 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Kcnu1O54982 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Kcnu1O54982 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.65■□□□□ 0.9
Kcnu1O54982 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Kcnu1O54982 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Kcnu1O54982 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Kcnu1O54982 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Kcnu1O54982 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Kcnu1O54982 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Kcnu1O54982 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Kcnu1O54982 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.63■□□□□ 0.89
Kcnu1O54982 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Kcnu1O54982 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kcnu1O54982 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.63■□□□□ 0.89
Kcnu1O54982 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.63■□□□□ 0.89
Kcnu1O54982 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.63■□□□□ 0.89
Kcnu1O54982 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kcnu1O54982 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kcnu1O54982 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Kcnu1O54982 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kcnu1O54982 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kcnu1O54982 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kcnu1O54982 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kcnu1O54982 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kcnu1O54982 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.62■□□□□ 0.89
Kcnu1O54982 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.62■□□□□ 0.89
Kcnu1O54982 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kcnu1O54982 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kcnu1O54982 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kcnu1O54982 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kcnu1O54982 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Kcnu1O54982 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Kcnu1O54982 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kcnu1O54982 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kcnu1O54982 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Kcnu1O54982 Gm13241-201ENSMUST00000094493 780 ntBASIC20.61■□□□□ 0.89
Kcnu1O54982 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Kcnu1O54982 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kcnu1O54982 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.61■□□□□ 0.89
Kcnu1O54982 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Kcnu1O54982 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kcnu1O54982 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kcnu1O54982 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Kcnu1O54982 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kcnu1O54982 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Kcnu1O54982 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kcnu1O54982 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kcnu1O54982 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kcnu1O54982 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.59■□□□□ 0.89
Kcnu1O54982 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Kcnu1O54982 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kcnu1O54982 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kcnu1O54982 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.58■□□□□ 0.89
Kcnu1O54982 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Kcnu1O54982 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Kcnu1O54982 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Kcnu1O54982 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.58■□□□□ 0.89
Kcnu1O54982 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.58■□□□□ 0.89
Kcnu1O54982 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kcnu1O54982 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Kcnu1O54982 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.58■□□□□ 0.88
Kcnu1O54982 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms