Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.54■□□□□ 0.72
ChkaO54804 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ChkaO54804 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ChkaO54804 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.54■□□□□ 0.72
ChkaO54804 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ChkaO54804 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ChkaO54804 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.53■□□□□ 0.72
ChkaO54804 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.53■□□□□ 0.72
ChkaO54804 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ChkaO54804 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ChkaO54804 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ChkaO54804 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.53■□□□□ 0.72
ChkaO54804 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ChkaO54804 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ChkaO54804 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ChkaO54804 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ChkaO54804 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.52■□□□□ 0.72
ChkaO54804 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ChkaO54804 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ChkaO54804 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.52■□□□□ 0.72
ChkaO54804 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ChkaO54804 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ChkaO54804 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ChkaO54804 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ChkaO54804 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
ChkaO54804 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ChkaO54804 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.51■□□□□ 0.71
ChkaO54804 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Gm21956-201ENSMUST00000179946 522 ntBASIC19.51■□□□□ 0.71
ChkaO54804 Serp2-204ENSMUST00000228055 705 ntBASIC19.51■□□□□ 0.71
ChkaO54804 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.51■□□□□ 0.71
ChkaO54804 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
ChkaO54804 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ChkaO54804 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.51■□□□□ 0.71
ChkaO54804 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ChkaO54804 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.5■□□□□ 0.71
ChkaO54804 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.5■□□□□ 0.71
ChkaO54804 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ChkaO54804 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ChkaO54804 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.49■□□□□ 0.71
ChkaO54804 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
ChkaO54804 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ChkaO54804 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ChkaO54804 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.48■□□□□ 0.71
ChkaO54804 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.48■□□□□ 0.71
ChkaO54804 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.48■□□□□ 0.71
ChkaO54804 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChkaO54804 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.48■□□□□ 0.71
ChkaO54804 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
ChkaO54804 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.48■□□□□ 0.71
ChkaO54804 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ChkaO54804 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ChkaO54804 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.47■□□□□ 0.71
ChkaO54804 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ChkaO54804 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.47■□□□□ 0.71
ChkaO54804 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.47■□□□□ 0.71
ChkaO54804 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.47■□□□□ 0.71
ChkaO54804 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.47■□□□□ 0.71
ChkaO54804 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ChkaO54804 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms