Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1O35604 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1O35604 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Npc1O35604 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.9■□□□□ 0.62
Npc1O35604 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1O35604 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.9■□□□□ 0.62
Npc1O35604 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Npc1O35604 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Npc1O35604 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1O35604 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.89■□□□□ 0.61
Npc1O35604 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Npc1O35604 Gm10493-201ENSMUST00000097270 612 ntBASIC18.88■□□□□ 0.61
Npc1O35604 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1O35604 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Npc1O35604 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.87■□□□□ 0.61
Npc1O35604 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Npc1O35604 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1O35604 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Npc1O35604 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Npc1O35604 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.86■□□□□ 0.61
Npc1O35604 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Gm5874-201ENSMUST00000096101 508 ntBASIC18.86■□□□□ 0.61
Npc1O35604 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Npc1O35604 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1O35604 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Npc1O35604 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.85■□□□□ 0.61
Npc1O35604 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1O35604 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Npc1O35604 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.84■□□□□ 0.61
Npc1O35604 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.84■□□□□ 0.61
Npc1O35604 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.84■□□□□ 0.61
Npc1O35604 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.84■□□□□ 0.61
Npc1O35604 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Npc1O35604 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1O35604 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Npc1O35604 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Npc1O35604 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1O35604 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1O35604 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1O35604 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1O35604 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.83■□□□□ 0.6
Npc1O35604 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Npc1O35604 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1O35604 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.83■□□□□ 0.6
Npc1O35604 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1O35604 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1O35604 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1O35604 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1O35604 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Npc1O35604 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1O35604 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms