Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Efnb3O35393 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Efnb3O35393 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Efnb3O35393 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Efnb3O35393 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Efnb3O35393 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.25■□□□□ 0.03
Efnb3O35393 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.25■□□□□ 0.03
Efnb3O35393 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.25■□□□□ 0.03
Efnb3O35393 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Efnb3O35393 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.25■□□□□ 0.03
Efnb3O35393 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Efnb3O35393 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Efnb3O35393 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.24■□□□□ 0.03
Efnb3O35393 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Efnb3O35393 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Efnb3O35393 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Efnb3O35393 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Efnb3O35393 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Efnb3O35393 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Efnb3O35393 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Efnb3O35393 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.23■□□□□ 0.03
Efnb3O35393 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Efnb3O35393 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.23■□□□□ 0.03
Efnb3O35393 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.23■□□□□ 0.03
Efnb3O35393 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Efnb3O35393 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Efnb3O35393 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Efnb3O35393 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.23■□□□□ 0.03
Efnb3O35393 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Efnb3O35393 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Efnb3O35393 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Efnb3O35393 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.22■□□□□ 0.03
Efnb3O35393 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Efnb3O35393 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Efnb3O35393 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.22■□□□□ 0.03
Efnb3O35393 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.21■□□□□ 0.03
Efnb3O35393 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Efnb3O35393 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Efnb3O35393 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.21■□□□□ 0.03
Efnb3O35393 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Efnb3O35393 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Efnb3O35393 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Efnb3O35393 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Efnb3O35393 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Efnb3O35393 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Efnb3O35393 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Efnb3O35393 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Efnb3O35393 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Efnb3O35393 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Efnb3O35393 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.21■□□□□ 0.02
Efnb3O35393 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Efnb3O35393 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Efnb3O35393 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Efnb3O35393 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Efnb3O35393 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.2■□□□□ 0.02
Efnb3O35393 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Efnb3O35393 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms