Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ebf3O08791 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ebf3O08791 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ebf3O08791 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.08■□□□□ 0.81
Ebf3O08791 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ebf3O08791 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ebf3O08791 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ebf3O08791 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Ebf3O08791 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ebf3O08791 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ebf3O08791 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ebf3O08791 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Ebf3O08791 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf3O08791 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ebf3O08791 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.06■□□□□ 0.8
Ebf3O08791 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf3O08791 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.05■□□□□ 0.8
Ebf3O08791 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf3O08791 Gm12933-201ENSMUST00000120203 872 ntBASIC20.05■□□□□ 0.8
Ebf3O08791 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf3O08791 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf3O08791 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf3O08791 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf3O08791 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf3O08791 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf3O08791 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf3O08791 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.04■□□□□ 0.8
Ebf3O08791 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf3O08791 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf3O08791 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf3O08791 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ebf3O08791 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ebf3O08791 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf3O08791 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.02■□□□□ 0.8
Ebf3O08791 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ebf3O08791 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ebf3O08791 Gm7514-201ENSMUST00000209475 934 ntBASIC20.02■□□□□ 0.8
Ebf3O08791 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.02■□□□□ 0.8
Ebf3O08791 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ebf3O08791 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ebf3O08791 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ebf3O08791 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ebf3O08791 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.01■□□□□ 0.79
Ebf3O08791 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Ebf3O08791 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf3O08791 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf3O08791 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf3O08791 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Ebf3O08791 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf3O08791 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf3O08791 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf3O08791 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf3O08791 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ebf3O08791 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ebf3O08791 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ebf3O08791 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Ebf3O08791 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ebf3O08791 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20■□□□□ 0.79
Ebf3O08791 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20■□□□□ 0.79
Ebf3O08791 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf3O08791 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ebf3O08791 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf3O08791 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms