Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
Sema3aO08665 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3aO08665 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3aO08665 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.6■□□□□ 0.73
Sema3aO08665 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3aO08665 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.6■□□□□ 0.73
Sema3aO08665 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3aO08665 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sema3aO08665 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sema3aO08665 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3aO08665 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.6■□□□□ 0.73
Sema3aO08665 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3aO08665 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3aO08665 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sema3aO08665 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Sema3aO08665 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sema3aO08665 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sema3aO08665 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Sema3aO08665 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sema3aO08665 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Sema3aO08665 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sema3aO08665 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.59■□□□□ 0.73
Sema3aO08665 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sema3aO08665 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sema3aO08665 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.59■□□□□ 0.73
Sema3aO08665 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sema3aO08665 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sema3aO08665 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sema3aO08665 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sema3aO08665 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sema3aO08665 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sema3aO08665 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sema3aO08665 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sema3aO08665 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Sema3aO08665 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sema3aO08665 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sema3aO08665 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sema3aO08665 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sema3aO08665 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sema3aO08665 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sema3aO08665 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sema3aO08665 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.57■□□□□ 0.72
Sema3aO08665 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.57■□□□□ 0.72
Sema3aO08665 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.57■□□□□ 0.72
Sema3aO08665 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.57■□□□□ 0.72
Sema3aO08665 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sema3aO08665 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sema3aO08665 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.56■□□□□ 0.72
Sema3aO08665 Gm40848-201ENSMUST00000221998 324 ntBASIC19.56■□□□□ 0.72
Sema3aO08665 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sema3aO08665 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sema3aO08665 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sema3aO08665 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sema3aO08665 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sema3aO08665 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.56■□□□□ 0.72
Sema3aO08665 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sema3aO08665 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.55■□□□□ 0.72
Sema3aO08665 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.55■□□□□ 0.72
Sema3aO08665 Gm27801-201ENSMUST00000184174 223 ntBASIC19.55■□□□□ 0.72
Sema3aO08665 Gm43060-201ENSMUST00000200621 289 ntBASIC19.55■□□□□ 0.72
Sema3aO08665 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.55■□□□□ 0.72
Sema3aO08665 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sema3aO08665 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sema3aO08665 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sema3aO08665 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sema3aO08665 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.55■□□□□ 0.72
Sema3aO08665 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sema3aO08665 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Sema3aO08665 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sema3aO08665 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sema3aO08665 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sema3aO08665 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sema3aO08665 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sema3aO08665 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
Sema3aO08665 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.53■□□□□ 0.72
Sema3aO08665 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.53■□□□□ 0.72
Sema3aO08665 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Sema3aO08665 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sema3aO08665 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sema3aO08665 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3aO08665 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3aO08665 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3aO08665 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sema3aO08665 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sema3aO08665 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sema3aO08665 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sema3aO08665 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sema3aO08665 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.51■□□□□ 0.71
Sema3aO08665 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms