Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1bO08603 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1bO08603 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1bO08603 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1bO08603 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1bO08603 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1bO08603 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.15■□□□□ 0.34
Raet1bO08603 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1bO08603 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Raet1bO08603 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Raet1bO08603 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.14■□□□□ 0.33
Raet1bO08603 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1bO08603 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.13■□□□□ 0.33
Raet1bO08603 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Raet1bO08603 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Raet1bO08603 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1bO08603 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Raet1bO08603 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Raet1bO08603 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.12■□□□□ 0.33
Raet1bO08603 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Raet1bO08603 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Raet1bO08603 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.12■□□□□ 0.33
Raet1bO08603 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Raet1bO08603 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.12■□□□□ 0.33
Raet1bO08603 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Raet1bO08603 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1bO08603 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.11■□□□□ 0.33
Raet1bO08603 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1bO08603 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.11■□□□□ 0.33
Raet1bO08603 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1bO08603 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1bO08603 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.11■□□□□ 0.33
Raet1bO08603 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.11■□□□□ 0.33
Raet1bO08603 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1bO08603 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1bO08603 Gm8493-201ENSMUST00000196881 489 ntBASIC17.11■□□□□ 0.33
Raet1bO08603 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.11■□□□□ 0.33
Raet1bO08603 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Raet1bO08603 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1bO08603 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1bO08603 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Gm45417-201ENSMUST00000209533 758 ntBASIC17.1■□□□□ 0.33
Raet1bO08603 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.1■□□□□ 0.33
Raet1bO08603 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Raet1bO08603 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.1■□□□□ 0.33
Raet1bO08603 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1bO08603 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.09■□□□□ 0.33
Raet1bO08603 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1bO08603 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1bO08603 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1bO08603 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Raet1bO08603 Gm43173-201ENSMUST00000202246 593 ntBASIC17.09■□□□□ 0.33
Raet1bO08603 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1bO08603 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1bO08603 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1bO08603 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1bO08603 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raet1bO08603 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raet1bO08603 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Raet1bO08603 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Raet1bO08603 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Raet1bO08603 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1bO08603 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1bO08603 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1bO08603 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1bO08603 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms