Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rfpl4bJ3QPR6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Gm38205-201ENSMUST00000192243 258 ntBASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rfpl4bJ3QPR6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfpl4bJ3QPR6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.34■■□□□ 1.17
Rfpl4bJ3QPR6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rfpl4bJ3QPR6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Rfpl4bJ3QPR6 Gm6420-201ENSMUST00000193885 723 ntBASIC22.34■■□□□ 1.17
Rfpl4bJ3QPR6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rfpl4bJ3QPR6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Rfpl4bJ3QPR6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rfpl4bJ3QPR6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfpl4bJ3QPR6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rfpl4bJ3QPR6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Rfpl4bJ3QPR6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
Rfpl4bJ3QPR6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfpl4bJ3QPR6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rfpl4bJ3QPR6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rfpl4bJ3QPR6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rfpl4bJ3QPR6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfpl4bJ3QPR6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Gm20049-201ENSMUST00000219950 730 ntBASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.31■■□□□ 1.16
Rfpl4bJ3QPR6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Gm13168-201ENSMUST00000121771 632 ntBASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Rfpl4bJ3QPR6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Rfpl4bJ3QPR6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rfpl4bJ3QPR6 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.29■■□□□ 1.16
Rfpl4bJ3QPR6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rfpl4bJ3QPR6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rfpl4bJ3QPR6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rfpl4bJ3QPR6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfpl4bJ3QPR6 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Gm6211-202ENSMUST00000167849 925 ntBASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rfpl4bJ3QPR6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms