Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn20G5E8X0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn20G5E8X0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Cldn20G5E8X0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn20G5E8X0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn20G5E8X0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn20G5E8X0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn20G5E8X0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn20G5E8X0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn20G5E8X0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn20G5E8X0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn20G5E8X0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn20G5E8X0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn20G5E8X0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn20G5E8X0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms