Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Gm9847-201ENSMUST00000052528 599 ntBASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Pcdh9F8VPK8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdh9F8VPK8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh9F8VPK8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pcdh9F8VPK8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh9F8VPK8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh9F8VPK8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh9F8VPK8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Golph3-205ENSMUST00000228671 2842 ntBASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh9F8VPK8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.81■□□□□ 0.76
Pcdh9F8VPK8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdh9F8VPK8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh9F8VPK8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh9F8VPK8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdh9F8VPK8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdh9F8VPK8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.77■□□□□ 0.76
Pcdh9F8VPK8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh9F8VPK8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms