Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 BC021767-201ENSMUST00000126387 1716 ntBASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh1F7BJK1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Etf1-202ENSMUST00000180351 108 ntBASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh1F7BJK1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Pcdh1F7BJK1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh1F7BJK1 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh1F7BJK1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh1F7BJK1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh1F7BJK1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh1F7BJK1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh1F7BJK1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms