Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh11xF6ZNL5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdh11xF6ZNL5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdh11xF6ZNL5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Pcdh11xF6ZNL5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
Pcdh11xF6ZNL5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh11xF6ZNL5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdh11xF6ZNL5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdh11xF6ZNL5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdh11xF6ZNL5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Gm8493-201ENSMUST00000196881 489 ntBASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh11xF6ZNL5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh11xF6ZNL5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh11xF6ZNL5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 Gm43173-201ENSMUST00000202246 593 ntBASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdh11xF6ZNL5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh11xF6ZNL5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
Pcdh11xF6ZNL5 Gm43017-201ENSMUST00000198296 752 ntBASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh11xF6ZNL5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh11xF6ZNL5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms