Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raph1F2Z3U3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raph1F2Z3U3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Raph1F2Z3U3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raph1F2Z3U3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Raph1F2Z3U3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Raph1F2Z3U3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Raph1F2Z3U3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raph1F2Z3U3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raph1F2Z3U3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raph1F2Z3U3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raph1F2Z3U3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Raph1F2Z3U3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raph1F2Z3U3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Raph1F2Z3U3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.14■□□□□ 0.66
Raph1F2Z3U3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Raph1F2Z3U3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Raph1F2Z3U3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Raph1F2Z3U3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Raph1F2Z3U3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.14■□□□□ 0.65
Raph1F2Z3U3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.14■□□□□ 0.65
Raph1F2Z3U3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms