Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Zc3h13E9Q784 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Zc3h13E9Q784 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Zc3h13E9Q784 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC27.2■■□□□ 1.94
Zc3h13E9Q784 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Zc3h13E9Q784 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC27.2■■□□□ 1.94
Zc3h13E9Q784 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Zc3h13E9Q784 Gm37055-201ENSMUST00000191866 133 ntBASIC27.2■■□□□ 1.94
Zc3h13E9Q784 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
Zc3h13E9Q784 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Gm9484-201ENSMUST00000195892 1159 ntBASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC27.19■■□□□ 1.94
Zc3h13E9Q784 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Zc3h13E9Q784 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Zc3h13E9Q784 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Zc3h13E9Q784 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Zc3h13E9Q784 Gm37563-201ENSMUST00000192580 1513 ntBASIC27.18■■□□□ 1.94
Zc3h13E9Q784 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Zc3h13E9Q784 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Zc3h13E9Q784 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Zc3h13E9Q784 AA386476-201ENSMUST00000098781 1665 ntBASIC27.16■■□□□ 1.94
Zc3h13E9Q784 AL672049.1-201ENSMUST00000197943 91 ntBASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3h13E9Q784 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC27.15■■□□□ 1.94
Zc3h13E9Q784 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Zc3h13E9Q784 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Zc3h13E9Q784 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Zc3h13E9Q784 Gm15043-201ENSMUST00000118843 1543 ntBASIC27.15■■□□□ 1.94
Zc3h13E9Q784 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Zc3h13E9Q784 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC27.14■■□□□ 1.94
Zc3h13E9Q784 AC131586.2-201ENSMUST00000228370 1512 ntBASIC27.14■■□□□ 1.94
Zc3h13E9Q784 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Zc3h13E9Q784 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
Zc3h13E9Q784 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Zc3h13E9Q784 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Zc3h13E9Q784 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Zc3h13E9Q784 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 AC121577.1-201ENSMUST00000227302 707 ntBASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Zc3h13E9Q784 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Zc3h13E9Q784 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC27.12■■□□□ 1.93
Zc3h13E9Q784 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Zc3h13E9Q784 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Zc3h13E9Q784 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Zc3h13E9Q784 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Zc3h13E9Q784 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Zc3h13E9Q784 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Zc3h13E9Q784 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Zc3h13E9Q784 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
Zc3h13E9Q784 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Zc3h13E9Q784 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Zc3h13E9Q784 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC27.1■■□□□ 1.93
Zc3h13E9Q784 Gm27032-201ENSMUST00000183124 1116 ntBASIC27.1■■□□□ 1.93
Zc3h13E9Q784 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Zc3h13E9Q784 Gm10819-201ENSMUST00000099988 561 ntBASIC27.09■■□□□ 1.93
Zc3h13E9Q784 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC27.09■■□□□ 1.93
Zc3h13E9Q784 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Zc3h13E9Q784 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Zc3h13E9Q784 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Zc3h13E9Q784 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Zc3h13E9Q784 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC27.08■■□□□ 1.93
Zc3h13E9Q784 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC27.08■■□□□ 1.93
Zc3h13E9Q784 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Zc3h13E9Q784 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Zc3h13E9Q784 Gm12896-201ENSMUST00000118430 226 ntBASIC27.07■■□□□ 1.92
Zc3h13E9Q784 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Zc3h13E9Q784 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Zc3h13E9Q784 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC27.07■■□□□ 1.92
Zc3h13E9Q784 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms