Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.6
Ift140E9PY46 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Ift140E9PY46 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ift140E9PY46 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.59
Ift140E9PY46 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ift140E9PY46 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ift140E9PY46 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ift140E9PY46 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Ift140E9PY46 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Ift140E9PY46 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ift140E9PY46 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Ift140E9PY46 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Ift140E9PY46 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ift140E9PY46 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
Ift140E9PY46 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC31.24■■■□□ 2.59
Ift140E9PY46 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC31.24■■■□□ 2.59
Ift140E9PY46 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC31.24■■■□□ 2.59
Ift140E9PY46 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ift140E9PY46 Gm9987-201ENSMUST00000069768 567 ntBASIC31.24■■■□□ 2.59
Ift140E9PY46 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ift140E9PY46 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ift140E9PY46 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
Ift140E9PY46 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ift140E9PY46 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ift140E9PY46 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ift140E9PY46 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ift140E9PY46 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ift140E9PY46 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC31.23■■■□□ 2.59
Ift140E9PY46 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
Ift140E9PY46 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC31.22■■■□□ 2.59
Ift140E9PY46 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ift140E9PY46 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Ift140E9PY46 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ift140E9PY46 AC153881.2-201ENSMUST00000214877 204 ntBASIC31.21■■■□□ 2.59
Ift140E9PY46 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ift140E9PY46 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ift140E9PY46 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Ift140E9PY46 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ift140E9PY46 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC31.21■■■□□ 2.59
Ift140E9PY46 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
Ift140E9PY46 Nrn1-203ENSMUST00000223611 1443 ntBASIC31.2■■■□□ 2.59
Ift140E9PY46 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
Ift140E9PY46 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC31.2■■■□□ 2.58
Ift140E9PY46 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC31.2■■■□□ 2.58
Ift140E9PY46 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC31.2■■■□□ 2.58
Ift140E9PY46 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ift140E9PY46 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC31.19■■■□□ 2.58
Ift140E9PY46 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Ift140E9PY46 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ift140E9PY46 Gm10231-201ENSMUST00000181584 441 ntBASIC31.19■■■□□ 2.58
Ift140E9PY46 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ift140E9PY46 Gm10175-202ENSMUST00000208752 441 ntBASIC31.19■■■□□ 2.58
Ift140E9PY46 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ift140E9PY46 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ift140E9PY46 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
Ift140E9PY46 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ift140E9PY46 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ift140E9PY46 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ift140E9PY46 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC31.18■■■□□ 2.58
Ift140E9PY46 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ift140E9PY46 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC31.17■■■□□ 2.58
Ift140E9PY46 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ift140E9PY46 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ift140E9PY46 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ift140E9PY46 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ift140E9PY46 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Ift140E9PY46 Mir5122-201ENSMUST00000175004 89 ntBASIC31.16■■■□□ 2.58
Ift140E9PY46 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC31.16■■■□□ 2.58
Ift140E9PY46 H3f3aos-201ENSMUST00000097448 2905 ntBASIC31.16■■■□□ 2.58
Ift140E9PY46 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ift140E9PY46 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ift140E9PY46 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ift140E9PY46 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ift140E9PY46 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ift140E9PY46 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ift140E9PY46 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ift140E9PY46 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ift140E9PY46 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Ift140E9PY46 Gm15378-201ENSMUST00000121894 207 ntBASIC31.14■■■□□ 2.57
Ift140E9PY46 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC31.14■■■□□ 2.57
Ift140E9PY46 Gm44549-201ENSMUST00000208351 577 ntBASIC31.14■■■□□ 2.57
Ift140E9PY46 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Ift140E9PY46 Gm43909-201ENSMUST00000203443 1876 ntBASIC31.14■■■□□ 2.57
Ift140E9PY46 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ift140E9PY46 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
Ift140E9PY46 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ift140E9PY46 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ift140E9PY46 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ift140E9PY46 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC31.13■■■□□ 2.57
Ift140E9PY46 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ift140E9PY46 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ift140E9PY46 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ift140E9PY46 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Ift140E9PY46 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ift140E9PY46 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ift140E9PY46 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC31.12■■■□□ 2.57
Ift140E9PY46 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ift140E9PY46 AA386476-201ENSMUST00000098781 1665 ntBASIC31.12■■■□□ 2.57
Ift140E9PY46 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC31.11■■■□□ 2.57
Ift140E9PY46 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms