Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 Golgb1-201ENSMUST00000023534 498 ntBASIC19.34■□□□□ 0.69
Gm28043E0CXC2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28043E0CXC2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm28043E0CXC2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm28043E0CXC2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.33■□□□□ 0.69
Gm28043E0CXC2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm28043E0CXC2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm28043E0CXC2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.33■□□□□ 0.69
Gm28043E0CXC2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28043E0CXC2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28043E0CXC2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Gm9847-201ENSMUST00000052528 599 ntBASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28043E0CXC2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28043E0CXC2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28043E0CXC2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28043E0CXC2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28043E0CXC2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28043E0CXC2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28043E0CXC2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28043E0CXC2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28043E0CXC2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28043E0CXC2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28043E0CXC2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gm28043E0CXC2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28043E0CXC2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms