Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim30cD3YVI9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim30cD3YVI9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Trim30cD3YVI9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Gm15039-201ENSMUST00000118914 875 ntBASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim30cD3YVI9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21■□□□□ 0.95
Trim30cD3YVI9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim30cD3YVI9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim30cD3YVI9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Gm45417-201ENSMUST00000209533 758 ntBASIC20.98■□□□□ 0.95
Trim30cD3YVI9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30cD3YVI9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim30cD3YVI9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30cD3YVI9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30cD3YVI9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30cD3YVI9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.97■□□□□ 0.95
Trim30cD3YVI9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30cD3YVI9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim30cD3YVI9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30cD3YVI9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Trim30cD3YVI9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Gm43137-201ENSMUST00000198052 594 ntBASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30cD3YVI9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms