Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 Gm12251-201ENSMUST00000117893 792 ntBASIC19.87■□□□□ 0.77
Tubb1A2AQ07 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb1A2AQ07 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Gm43137-201ENSMUST00000198052 594 ntBASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.86■□□□□ 0.77
Tubb1A2AQ07 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.86■□□□□ 0.77
Tubb1A2AQ07 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb1A2AQ07 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Spcs1-204ENSMUST00000226782 949 ntBASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb1A2AQ07 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb1A2AQ07 Golph3-205ENSMUST00000228671 2842 ntBASIC19.83■□□□□ 0.77
Tubb1A2AQ07 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb1A2AQ07 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb1A2AQ07 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb1A2AQ07 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb1A2AQ07 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb1A2AQ07 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.83■□□□□ 0.76
Tubb1A2AQ07 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tubb1A2AQ07 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Tubb1A2AQ07 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tubb1A2AQ07 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Tubb1A2AQ07 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tubb1A2AQ07 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb1A2AQ07 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb1A2AQ07 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms