Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm13146-201ENSMUST00000118508 780 ntBASIC20.48■□□□□ 0.87
Scn1aA2APX8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn1aA2APX8 Gm18671-201ENSMUST00000214826 683 ntBASIC20.48■□□□□ 0.87
Scn1aA2APX8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn1aA2APX8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn1aA2APX8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn1aA2APX8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Scn1aA2APX8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn1aA2APX8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn1aA2APX8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.45■□□□□ 0.86
Scn1aA2APX8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn1aA2APX8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Scn1aA2APX8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Scn1aA2APX8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn1aA2APX8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn1aA2APX8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn1aA2APX8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn1aA2APX8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn1aA2APX8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scn1aA2APX8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.41■□□□□ 0.86
Scn1aA2APX8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Scn1aA2APX8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn1aA2APX8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn1aA2APX8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn1aA2APX8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn1aA2APX8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn1aA2APX8 Gm7860-201ENSMUST00000121190 879 ntBASIC20.4■□□□□ 0.86
Scn1aA2APX8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Scn1aA2APX8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn1aA2APX8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn1aA2APX8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn1aA2APX8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.39■□□□□ 0.86
Scn1aA2APX8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.39■□□□□ 0.86
Scn1aA2APX8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn1aA2APX8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
Scn1aA2APX8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn1aA2APX8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn1aA2APX8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms