Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC31.3■■■□□ 2.6
Shroom2A2ALU4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Shroom2A2ALU4 Gm5417-201ENSMUST00000079706 384 ntBASIC31.3■■■□□ 2.6
Shroom2A2ALU4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
Shroom2A2ALU4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Shroom2A2ALU4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Shroom2A2ALU4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Shroom2A2ALU4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Shroom2A2ALU4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Shroom2A2ALU4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Shroom2A2ALU4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC31.28■■■□□ 2.6
Shroom2A2ALU4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Shroom2A2ALU4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC31.28■■■□□ 2.6
Shroom2A2ALU4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Shroom2A2ALU4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Shroom2A2ALU4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shroom2A2ALU4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shroom2A2ALU4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shroom2A2ALU4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shroom2A2ALU4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shroom2A2ALU4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
Shroom2A2ALU4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Shroom2A2ALU4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.59
Shroom2A2ALU4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC31.25■■■□□ 2.59
Shroom2A2ALU4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Shroom2A2ALU4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Shroom2A2ALU4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Shroom2A2ALU4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC31.24■■■□□ 2.59
Shroom2A2ALU4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC31.24■■■□□ 2.59
Shroom2A2ALU4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC31.24■■■□□ 2.59
Shroom2A2ALU4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Shroom2A2ALU4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Shroom2A2ALU4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC31.23■■■□□ 2.59
Shroom2A2ALU4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC31.23■■■□□ 2.59
Shroom2A2ALU4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shroom2A2ALU4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shroom2A2ALU4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shroom2A2ALU4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shroom2A2ALU4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Shroom2A2ALU4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC31.21■■■□□ 2.59
Shroom2A2ALU4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC31.21■■■□□ 2.59
Shroom2A2ALU4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Shroom2A2ALU4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Shroom2A2ALU4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Shroom2A2ALU4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Shroom2A2ALU4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Shroom2A2ALU4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Shroom2A2ALU4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Shroom2A2ALU4 Gm43403-201ENSMUST00000198011 1786 ntBASIC31.19■■■□□ 2.58
Shroom2A2ALU4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Shroom2A2ALU4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
Shroom2A2ALU4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC31.18■■■□□ 2.58
Shroom2A2ALU4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Shroom2A2ALU4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
Shroom2A2ALU4 Il17rd-202ENSMUST00000223942 2186 ntBASIC31.17■■■□□ 2.58
Shroom2A2ALU4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC31.17■■■□□ 2.58
Shroom2A2ALU4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Shroom2A2ALU4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Shroom2A2ALU4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Shroom2A2ALU4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Shroom2A2ALU4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Shroom2A2ALU4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Shroom2A2ALU4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Shroom2A2ALU4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Shroom2A2ALU4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Shroom2A2ALU4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC31.15■■■□□ 2.58
Shroom2A2ALU4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Shroom2A2ALU4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Shroom2A2ALU4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Shroom2A2ALU4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Shroom2A2ALU4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC31.14■■■□□ 2.58
Shroom2A2ALU4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Shroom2A2ALU4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Shroom2A2ALU4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC31.14■■■□□ 2.57
Shroom2A2ALU4 H2-K2-201ENSMUST00000174250 1049 ntBASIC31.14■■■□□ 2.57
Shroom2A2ALU4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Shroom2A2ALU4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC31.13■■■□□ 2.57
Shroom2A2ALU4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Shroom2A2ALU4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Shroom2A2ALU4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Shroom2A2ALU4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Shroom2A2ALU4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
Shroom2A2ALU4 Gm5913-201ENSMUST00000119397 1399 ntBASIC31.12■■■□□ 2.57
Shroom2A2ALU4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC31.11■■■□□ 2.57
Shroom2A2ALU4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Shroom2A2ALU4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms