Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-1A0N8R0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-1A0N8R0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-1A0N8R0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 BC021767-201ENSMUST00000126387 1716 ntBASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-1A0N8R0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-1A0N8R0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.54■□□□□ 0.08
Trav12d-1A0N8R0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav12d-1A0N8R0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.52■□□□□ 0.08
Trav12d-1A0N8R0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms