Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm7290-201ENSMUST00000104990 617 ntBASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm12918-201ENSMUST00000120234 636 ntBASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm15710-201ENSMUST00000121821 636 ntBASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm5075-201ENSMUST00000196916 622 ntBASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3854A0A1B0GSS6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm13148-201ENSMUST00000118892 745 ntBASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3854A0A1B0GSS6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3854A0A1B0GSS6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3854A0A1B0GSS6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3854A0A1B0GSS6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3854A0A1B0GSS6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3854A0A1B0GSS6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3854A0A1B0GSS6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3854A0A1B0GSS6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm13534-201ENSMUST00000121169 513 ntBASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3854A0A1B0GSS6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3854A0A1B0GSS6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm12527-201ENSMUST00000117967 564 ntBASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm20760-201ENSMUST00000179197 648 ntBASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms