Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Gm44832-201ENSMUST00000208849 2303 ntBASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm3880A0A1B0GSB3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Gm5953-201ENSMUST00000220644 2616 ntBASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Gm30023-201ENSMUST00000197970 889 ntBASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3880A0A1B0GSB3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Gm5540-201ENSMUST00000131852 1848 ntBASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3880A0A1B0GSB3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3880A0A1B0GSB3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms