Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Gm13241-201ENSMUST00000094493 780 ntBASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Gm9847-201ENSMUST00000052528 599 ntBASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpl23a-ps3A0A140T8M7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms