Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5580A0A0N4SVP8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5580A0A0N4SVP8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5580A0A0N4SVP8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5580A0A0N4SVP8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5580A0A0N4SVP8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5580A0A0N4SVP8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5580A0A0N4SVP8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm5580A0A0N4SVP8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm5580A0A0N4SVP8 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5580A0A0N4SVP8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5580A0A0N4SVP8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm5580A0A0N4SVP8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5580A0A0N4SVP8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5580A0A0N4SVP8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.02■□□□□ 0.96
Gm5580A0A0N4SVP8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gm5580A0A0N4SVP8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5580A0A0N4SVP8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5580A0A0N4SVP8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5580A0A0N4SVP8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5580A0A0N4SVP8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms